Structure Catalog (Public)
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1
Three Circles on a Rod
2
Force Clamp
3
Asymmetric Rotaxane
4
Semicircle with Loop
5
Circle
6
Prestressed Elastic Beams; ZH4
7
Half Rotaxane
8
NuPOD ring
9
ZR9
10
ZR11
11
ZR13
12
ZR17
13
ZR14
14
24 Helix-Bundle DNA Curl
15
12 Helix-Bundle DNA Curl
16
Half Dumbell
17
ZR19
18
6HB-DNA curl
19
12HB-DNA curl
20
24HB-DNA curl
21
DNA Ring Nanotemplate
22
open, tension-loaded DNA clamps
23
closed, tension-free clamps
24
extenders for DNA clamps
25
60 nm NPC channel
26
40 nm prism
27
Nanotrap
28
PLY-DNA Pore Ring
Drag to adjust the number of frozen columns
Qiancheng Xiong
Chenxiang Lin
Origami
p7308
Honeycomb
2019
DNA Origami Post‐Processing by CRISPR‐Cas12a
Qiancheng Xiong
Qiancheng Xiong
Chun Xie
Chenxiang Lin
Origami
p7308
Custom
Honeycomb
2019
DNA Origami Post‐Processing by CRISPR‐Cas12a
Qiancheng Xiong
Qiancheng Xiong
Chenxiang Lin
Origami
p8064
Honeycomb
2019
DNA Origami Post‐Processing by CRISPR‐Cas12a
Qiancheng Xiong
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p3024
Honeycomb
2018
DNA Origami Post‐Processing by CRISPR‐Cas12a
Qiancheng Xiong
Qi Shen
Chenxiang Lin
Origami
p8064
Honeycomb
2015
DNA Origami Post‐Processing by CRISPR‐Cas12a
A Programmable DNA Origami Platform for Organizing Intrinsically Disordered Nucleoporins within Nanopore Confinement
with outer handle extensions for Cy5 anti-handle probes
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p8064
Honeycomb
2014
DNA Origami Post‐Processing by CRISPR‐Cas12a
Qiancheng Xiong
John T. Powell
Chenxiang Lin
Origami
p7308
Honeycomb
2016
DNA Origami Post‐Processing by CRISPR‐Cas12a
DNA Origami Rotaxanes: Tailored Synthesis and Controlled Structure Switching
Qiancheng Xiong
Qi Shen
Patrick D. Ellis Fisher
Chenxiang Lin
Origami
p8064
Honeycomb
2015
A Programmable DNA Origami Platform for Organizing Intrinsically Disordered Nucleoporins within Nanopore Confinement
Modeling HIV-1 nuclear entry with nucleoporin-gated DNA-origami channels
DNA Origami Post‐Processing by CRISPR‐Cas12a
Functionalized DNA-Origami-Protein Nanopores Generate Large Transmembrane Channels with Programmable Size-Selectivity
Qi Shen
Zhao Zhang
Chenxiang Lin
Origami
p8064
Square
2017
Placing and Shaping Liposomes with Reconfigurable DNA Nanocages
A DNA cage (inner diameter = 49 nm) with 120-bp 4hb pillars for templating 1D liposome arrays. Leaving out all or part of the pillar staple strands results in structural variations, including templates for tubular and toroidal liposomes.
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p8064
Square
2017
Placing and Shaping Liposomes with Reconfigurable DNA Nanocages
A DNA cage (inner diameter = 66 nm) with 42-bp 4hb pillars for templating tubular liposomes. Leaving out the staple strands of two neighboring pillars results in a template for toroidal liposomes.
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p8064
Square
2017
Placing and Shaping Liposomes with Reconfigurable DNA Nanocages
A DNA cage (inner diameter = 28 nm) with 120-bp 4hb pillars for templating 1D liposome arrays. Leaving out all pillar staple strands results in a template for tubular liposomes.
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p8064
Square
2017
Placing and Shaping Liposomes with Reconfigurable DNA Nanocages
A fan-shaped DNA nanocage with teeth at top and bottom offset by 11° for templating helical liposomes.
Qiancheng Xiong
Zhao Zhang
Chenxiang Lin
Origami
p8064
Square
2017
Placing and Shaping Liposomes with Reconfigurable DNA Nanocages
A cuboidal DNA nanocage for templating lipid tubule arrays.
Qiancheng Xiong
Michael W. Grome
Chenxiang Lin
Origami
p8064
Honeycomb
2019
Stiffness and Membrane Anchor Density Modulate DNA-Nanospring-Induced Vesicle Tubulation
Qiancheng Xiong
Michael W. Grome
Chenxiang Lin
Origami
p3024
Honeycomb
2019
Stiffness and Membrane Anchor Density Modulate DNA-Nanospring-Induced Vesicle Tubulation
Qiancheng Xiong
John T. Powell
Chenxiang Lin
Origami
p7308
Square
2016
DNA Origami Rotaxanes: Tailored Synthesis and Controlled Structure Switching
John T. Powell
Zhao Zhang
Chenxiang Lin
Origami
p8064
Honeycomb
2017
A Programmable DNA-Origami Platform for Studying Lipid Transfer between Bilayers
Qiancheng Xiong
Michael W. Grome
Chenxiang Lin
Origami
p1512
p7308
Honeycomb
2019
Stiffness and Membrane Anchor Density Modulate DNA-Nanospring-Induced Vesicle Tubulation
Yellow strands = internal handles, Cyan strands = external handles, Magenta strands = linkers
Michael W. Grome
Michael W. Grome
Chenxiang Lin
Origami
p3024
Honeycomb
2019
Stiffness and Membrane Anchor Density Modulate DNA-Nanospring-Induced Vesicle Tubulation
Yellow strands = internal handles, Cyan strands = external handles, Magenta strands = linkers
Michael W. Grome
Zhao Zhang
Michael W. Grome
Chenxiang Lin
Origami
p8064
Honeycomb
2018
Vesicle Tubulation with Self‐Assembling DNA Nanosprings
Stiffness and Membrane Anchor Density Modulate DNA-Nanospring-Induced Vesicle Tubulation
Yellow strands = internal handles, Cyan strands = external handles, Magenta strands = linkers
Michael W. Grome
Yang Yang
Chenxiang Lin
Origami
p3024
p7308
p7560
p8064
Honeycomb
2016
Self-Assembly of Size-Controlled Liposomes on DNA Nanotemplates
Designs for 29 nm, 46 nm, 60 nm, 94 nm rings
Qiancheng Xiong
Longfei Liu
Chenxiang Lin
Origami
p1512
Square
2020
Actuating tension-loaded DNA clamps drives membrane tubulation
Open, tension-loaded DNA clamps have near-flat configurations, which can transform into closed, tension-released shapes with pre-designed curvatures upon triggered strand displacement.
Longfei Liu
Longfei Liu
Chenxiang Lin
Origami
p1512
Square
2020
Actuating tension-loaded DNA clamps drives membrane tubulation
Closed, tension-free DNA clamps have high curvatures, which can induce membrane tubulation.
Longfei Liu
Longfei Liu
Chenxiang Lin
Origami
p3024
Square
2021
Actuating tension-loaded DNA clamps drives membrane tubulation
Extenders can be attached to both ends of DNA clamps for better visualization.
Longfei Liu
Ran Yang
Qingzhou Feng
Chenxiang Lin
Origami
p8064
p7308
Square
2021
Modeling HIV-1 nuclear entry with nucleoporin-gated DNA-origami channels
Qingzhou Feng
Qingzhou Feng
Chenxiang Lin
Origami
p8064
Square
2019
Modeling HIV-1 nuclear entry with nucleoporin-gated DNA-origami channels
Qingzhou Feng
Qi Shen
Chenxiang Lin
Origami
p8064
Square
2021
DNA-Origami NanoTrap for Studying the Selective Barriers Formed by Phenylalanine-Glycine-Rich Nucleoporins
Qi Shen
Qiancheng Xiong
Qi Shen
Chenxiang Lin
Origami
p8064
Honeycomb
2022
Functionalized DNA-Origami-Protein Nanopores Generate Large Transmembrane Channels with Programmable Size-Selectivity
The DNA ring (Figure 1 and S2) was assembled from the p8064 scaffold strand (50 nM), a pool of staple strands (200 nM each) in a 1× TE buffer (5 mM Tris•HCl, 1 mM EDTA, pH 8.0) containing 16 mM MgCl2, using a 36-hour annealing program (80−65 °C, -1 °C/5 min; 64−24 °C, -1 °C/50 min; 15 °C hold).
Qiancheng Xiong
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